Curriculum Vitae

ARTICLES
  • A. Caro-Quintero* and K. T. Konstantinidis. Inter-phylum HGT has shaped the metabolism of several mesophilic and anaerobic bacteria. ISME J (2015). 9(4):958-67. 2015.
  • M. Vital, B. Chai, B. Østman, J. Cole, K. T. Konstantinidis, and J. M. Tiedje. Gene expression analysis of E. coli strains provides insights into the role of gene regulation in diversification. ISME J (2014). 9(5):1130-40. 2015.
  • K. T. Konstantinidis and R. Rosselló-Móra. Classifying the uncultivated microbial majority: A place for metagenomic data in the Candidatus proposal. Syst Appl Microbiol (2015). 38(4):223-30.
  • L. M. Rodriguez-R*, W. A. Overholt, C. Hagan, M. Huettel, J. E. Kostka, and K. T. Konstantinidis Microbial community successional patterns in beach sands impacted by the Deepwater Horizon oil spill. ISME J (2015). 9(9):1928-40. 2015.
  • M. R. Weigand*, A. Pena-Gonzalez*, T. B. Shirey, R. G. Broeker, M. K. Ishaq, K. T. Konstantinidis, and B. H. Raphael. Implications of Genome-Based Discrimination between Clostridium botulinum Group I and Clostridium sporogenes Strains for Bacterial Taxonomy. Applied and Environmental Microbiology (2015). 81(16):5420-9.
BOOKS
  • K. Konstantinidis and E. Stackebrandt. Defining taxonomic ranks. In The Prokaryotes. M.Dworkin et al (Eds.). New York: Springer-Verlag. To appear in 2013.
  • K. T. Konstantinidis. Metagenomic insights into bacterial species. In Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. Frans J. de Bruijn editor. John Wiley & Sons, Inc. Hoboken, New Jersey, USA. 2011.
  • J. Cole, K. T. Konstantinidis, R. J. Farris, and J. M. Tiedje. Microbial diversity and phylogeny: extending from rRNAs to genomes. In Environmental Molecular Biology. WT. Liu and J. Jansson (eds). Horizon Scientific Press. Norwich, UK. 2009.
  • K. T. Konstantinidis, and J. M. Tiedje. Microbial diversity and genomics. In Microbial Functional Genomics. J. Zhou, D. K. Thompson, Y. Xu, and J. M. Tiedje (eds.) John Wiley & Sons. Hoboken, New Jersey, 2004, pg. 21-46.
  • K. Konstantinidis. Pesticide residues in cucumber crops in Northern Greece (in Greek). In Integrated management of disease and pest of plants. Aristotle University of Thessaloniki, 2000. (Book series on sustainable agriculture sponsored by the European Union).
PROCEEDINGS
  • Konstantinidis K. T., and J. M. Tiedje. 2004. Modeling DNA microarray performance for genetic studies. 104th American Society for Microbiology, General Meeting, May 23-27, 2004, New Orleans, LA, USA.
  • Konstantinidis K. T., and J. M. Tiedje. 2004. Genomic insights to advance the bacterial species concept. Genomes 2004, April 14-17, Hinxton Cambridgeshire, UK.
  • Konstantinidis K. T., and J. M. Tiedje. 2004. Trends between gene content and genome size in prokaryotic species. 102nd American Society for Microbiology, General Meeting, May 18-22, 2003, Washington, DC, USA.
  • Konstantinidis K. T., N. Isaacs, S. Simpson, D. Long, and T. L. Marsh. 2001. Characterization of copper-resistant bacteria from a contaminated superfund site. 101st American Society for Microbiology, General Meeting, May 20-24, 2001, Orlando, Fl, USA.
PRESENTATIONS
  • N. DeLeon*, A. Negron, N. Matthew, A. Bougiatoioti, S.M. Waters*, A. Nenes, and K. T. Konstantinidis. Bacterial phenotypes: Implications for cloud condensation. Astrobiology Science Conference. June 15-19, 2015. Chicago, IL, USA.
  • A. Pena-Gonzalez*, J. K. Hatt, M.R. Weigand*, G. Trueba, W. Cevallos, J. Eisenberg, K. T. Konstantinidis and K. Levy. Effect of diarrheal disease and biogeographic factors in shaping the gut microbiota composition of individuals from Northern Coastal Ecuador. In the 115th American Society for Microbiology, General Meeting. May 30-June 2, 2015. New Orleans, Louisiana, USA.
  • M. R. Weigand*, A. Pena-Gonzalez*, T. B. Shirey, R. G. Broeker, M. K. Ishaq, K. T. Konstantinidis and B. H. Raphael. Genome-based discrimination between Group I Clostridium botulinum and Clostridium sporogenes strains: implications for bacterial taxonomy. In the 115th American Society for Microbiology, General Meeting. May 30-June 2, 2015. New Orleans, Louisiana, USA.
  • A. Huang, M. R. Weigand*, A. Pena-Gonzalez*, K. T. Konstantinidis and C. L. Tarr. Metagenomic Pathogen Detection and Gut microbiome Response to Foodborne Illness. In the International Conference on Emerging Infectious Diseases, ICEID. August 24-26, 2015. Atlanta, GA, USA
  • A. Huang, M. R. Weigand*, A. Pena-Gonzalez*, K. T. Konstantinidis and C. L. Tarr. Metagenomic Pathogen Detection and Gut microbiome Response to Acute Foodborne Salmonella infection. In the Sequencing, Finishing and Analysis in the Future Meeting, SFAF. May 27-29, 2015. Santa Fe, NM, USA.